C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lethal, Chr 7, Rinchik 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117354 l7Rn6-002 ENSMUSG00000062797 10090 - 7:89918924-89941199 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000117354
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000117354 12.360±1.59 6.554±2.31 7.106±0.59 14.736±4.96 13.337±4.22 9.832±3.31 19.180±1.73 17.652±2.76 9.737±2.72 8.766±3.84 9.136±2.21 14.564±2.74 2.642±0.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00073O CIL_00073O_0002 CGP 7:89917529-89980983

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0007030 IMP Golgi organization
GO:0030324 IMP lung development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278483 C11orf73-001 protein_coding Homo_sapiens 0 468
ENST00000529405 C11orf73-008 retained_intron Homo_sapiens 0 303
ENST00000530208 C11orf73-003 processed_transcript Homo_sapiens 1e-26 124
ENST00000531485 C11orf73-006 processed_transcript Homo_sapiens 0 532
ENST00000533986 C11orf73-002 protein_coding Homo_sapiens 1e-18 99
ENST00000590455 AC007229.3-001 processed_pseudogene Homo_sapiens 1e-33 147
ENST00000618164 C11orf73-201 protein_coding Homo_sapiens 0 468

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