C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein L1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117766 Mrpl1-001 ENSMUSG00000029486 10090 + 5:96209493-96266727 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverOvaryTestisENSMUST00000117766
Transcript ID Colon Liver Ovary Testis
ENSMUST00000117766 0.539±0.00 0.888±0.00 1.143±0.12 1.530±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007HW CIL_0007HW_0003 CGP 5:96070333-96266727
CIL_00051W CIL_00051W_0003 CGP 5:96209493-96784728

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003735 IEA structural constituent of ribosome
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0006412 IEA translation
GO:0015934 IEA large ribosomal subunit
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315567 MRPL1-001 protein_coding Homo_sapiens 0 865
ENST00000502384 MRPL1-002 protein_coding Homo_sapiens 0 566
ENST00000504901 MRPL1-006 protein_coding Homo_sapiens 0 348
ENST00000506674 MRPL1-005 processed_transcript Homo_sapiens 0.0000000000009 79

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