C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 48 (heme transporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117892 Slc48a1-001 ENSMUSG00000081534 10090 + 15:97784355-97792692 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117892
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117892 121.642±58.72 121.681±3.54 48.847±6.24 21.809±4.58 77.797±8.74 33.862±3.47 32.225±6.28 91.320±8.45 37.217±11.96 89.611±6.25 15.726±7.82 62.491±16.57 5.947±4.53 7.705±3.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002OC CIL_0002OC_0002 CGP 15:97744770-97792692
CIL_0003DF CIL_0003DF_0003 CGP 15:97784355-97844502

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005764 IEA lysosome
GO:0005768 IEA endosome
GO:0008150 ND biological_process
GO:0015232 IEA heme transporter activity
GO:0015886 IEA heme transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000442218 SLC48A1-001 protein_coding Homo_sapiens 0 627
ENST00000442892 SLC48A1-002 protein_coding Homo_sapiens 0 390
ENST00000547002 SLC48A1-007 protein_coding Homo_sapiens 0 396
ENST00000551301 SLC48A1-006 nonsense_mediated_decay Homo_sapiens 0 612

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