C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Dmx-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118163 Dmxl2-004 ENSMUSG00000041268 10090 - 9:54365158-54501626 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118163
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118163 1.517±0.32 0.603±0.32 0.400±0.04 2.356±0.08 0.603±0.25 0.241±0.02 1.150±0.22 1.793±0.41 0.537±0.28 1.931±0.23 0.164±0.07 1.151±0.81 3.478±1.96 2.530±0.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YR CIL_0007YR_0002 VISTA 9:54035032-54637557
CIL_000506 CIL_000506_0003 CGP 9:54286486-54501760

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005615 IEA extracellular space
GO:0008021 IEA synaptic vesicle
GO:0008150 ND biological_process
GO:0017137 IEA Rab GTPase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000251076 DMXL2-001 protein_coding Homo_sapiens 0 9444
ENST00000449909 DMXL2-003 protein_coding Homo_sapiens 0 3842
ENST00000543779 DMXL2-014 protein_coding Homo_sapiens 0 9463
ENST00000558124 DMXL2-009 processed_transcript Homo_sapiens 0 580
ENST00000558507 DMXL2-002 retained_intron Homo_sapiens 0 381
ENST00000559059 DMXL2-013 protein_coding Homo_sapiens 0 237
ENST00000559062 DMXL2-011 retained_intron Homo_sapiens 0 396
ENST00000559498 DMXL2-007 nonsense_mediated_decay Homo_sapiens 0 322
ENST00000559769 DMXL2-005 retained_intron Homo_sapiens 0 719
ENST00000559868 DMXL2-012 retained_intron Homo_sapiens 0 453
ENST00000560211 DMXL2-010 retained_intron Homo_sapiens 0 366
ENST00000560421 DMXL2-006 processed_transcript Homo_sapiens 0 721
ENST00000560891 DMXL2-004 protein_coding Homo_sapiens 0 4277
ENST00000561079 DMXL2-008 retained_intron Homo_sapiens 0 689

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