C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13535
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118714 Gm13535-001 ENSMUSG00000084292 10090 - 2:57272564-57275686 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000118714
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000118714 0.042±0.01 0.015±0.00 0.124±0.08 0.119±0.03 0.019±0.00 0.053±0.02 0.033±0.02 0.094±0.00 0.017±0.00 0.120±0.11 0.181±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007NB CIL_0007NB_0002 UCNEbase 2:56227555-57879432
CIL_000759 CIL_000759_0002 CGP 2:57106830-57370719
CIL_0008JK CIL_0008JK_0002 VISTA 2:57217307-57818247
CIL_000756 CIL_000756_0002 CGP 2:57237635-58045860

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258607 CKAP2-001 protein_coding Homo_sapiens 0 300
ENST00000378034 CKAP2-002 protein_coding Homo_sapiens 0 257
ENST00000378037 CKAP2-003 protein_coding Homo_sapiens 0 300
ENST00000490903 CKAP2-004 protein_coding Homo_sapiens 0 300

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