C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium channel tetramerisation domain containing 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118762 Kctd20-003 ENSMUSG00000005936 10090 + 17:28952436-28969549 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118762
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118762 18.279±3.66 8.499±2.38 16.492±2.07 26.849±0.30 15.306±2.69 11.173±0.95 8.999±0.35 10.461±1.02 15.403±8.59 19.327±0.67 10.943±1.04 14.851±4.56 20.468±4.55 5.129±1.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002YB CIL_0002YB_0002 CGP 17:28934291-28969549
CIL_0002YA CIL_0002YA_0002 CGP 17:28951950-29007945

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0005737 IDA cytoplasm
GO:0008150 ND biological_process
GO:0042327 IDA positive regulation of phosphorylation
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265344 KCTD20-005 nonsense_mediated_decay Homo_sapiens 0 989
ENST00000373731 KCTD20-001 protein_coding Homo_sapiens 0 1218
ENST00000449081 KCTD20-004 protein_coding Homo_sapiens 0 734
ENST00000474988 KCTD20-002 processed_transcript Homo_sapiens 0 737
ENST00000481911 KCTD20-003 nonsense_mediated_decay Homo_sapiens 0 734
ENST00000536244 KCTD20-201 protein_coding Homo_sapiens 0 989

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