C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptotagmin III
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118831 Syt3-001 ENSMUSG00000030731 10090 + 7:44384154-44400187 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118831
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118831 0.404±0.00 2.149±0.76 1.767±0.09 0.963±0.49 0.429±0.20 0.364±0.25 1.847±0.39 0.406±0.43 0.504±0.04 0.345±0.20 0.609±0.23 0.018±0.00 0.410±0.16

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000149 IEA SNARE binding
GO:0001786 IEA phosphatidylserine binding
GO:0005215 IEA transporter activity
GO:0005515 IPI protein binding
GO:0005544 IEA calcium-dependent phospholipid binding
GO:0005768 IEA endosome
GO:0008021 IEA synaptic vesicle
GO:0016020 IEA membrane
GO:0017156 IEA calcium ion-dependent exocytosis
GO:0019905 IEA syntaxin binding
GO:0030276 IEA clathrin binding
GO:0031340 IEA positive regulation of vesicle fusion
GO:0051592 IEA response to calcium ion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338916 SYT3-003 protein_coding Homo_sapiens 0 2379
ENST00000544769 SYT3-201 protein_coding Homo_sapiens 0 2379
ENST00000593901 SYT3-001 protein_coding Homo_sapiens 0 2379
ENST00000595117 SYT3-006 retained_intron Homo_sapiens 0 708
ENST00000598997 SYT3-005 protein_coding Homo_sapiens 0 366
ENST00000600079 SYT3-002 protein_coding Homo_sapiens 0 2379

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