C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synaptotagmin III
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030731 Syt3 10090 + 7:44384102-44400187 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000118831 Syt3-001 44384154-44400187 protein_coding
  ENSMUST00000118962 Syt3-002 44384102-44400029 protein_coding
  ENSMUST00000120262 Syt3-003 44384868-44399763 protein_coding
  ENSMUST00000130707 Syt3-006 44384604-44386051 protein_coding
  ENSMUST00000130844 Syt3-007 44384604-44386121 protein_coding
  ENSMUST00000132399 Syt3-005 44384127-44385449 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118831ENSMUST00000118962ENSMUST00000120262ENSMUST00000130707ENSMUST00000130844ENSMUST00000132399
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118831 0.404±0.00 2.149±0.76 N/A 1.767±0.09 0.963±0.49 0.429±0.20 0.364±0.25 1.847±0.39 0.406±0.43 0.504±0.04 0.345±0.20 0.609±0.23 0.018±0.00 0.410±0.16
ENSMUST00000118962 1.428±0.29 3.110±1.08 1.339±0.03 10.334±6.21 1.252±0.63 0.973±0.34 0.839±0.18 2.256±0.69 0.575±0.60 0.864±0.35 0.518±0.26 1.268±0.54 0.045±0.01 0.378±0.09
ENSMUST00000120262 N/A N/A N/A 10.893±13.15 N/A N/A N/A N/A 0.033±0.03 N/A 0.575±0.32 0.981±0.36 0.084±0.05 N/A
ENSMUST00000130707 N/A 8.098±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130844 N/A N/A N/A N/A N/A N/A N/A N/A 0.031±0.00 N/A N/A N/A 0.071±0.00 N/A
ENSMUST00000132399 N/A N/A N/A N/A N/A N/A N/A N/A 0.046±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000149 IEA SNARE binding
GO:0001786 IEA phosphatidylserine binding
GO:0005215 IEA transporter activity
GO:0005515 IPI protein binding
GO:0005544 IEA calcium-dependent phospholipid binding
GO:0005768 IEA endosome
GO:0008021 IEA synaptic vesicle
GO:0016020 IEA membrane
GO:0017156 IEA calcium ion-dependent exocytosis
GO:0019905 IEA syntaxin binding
GO:0030276 IEA clathrin binding
GO:0031340 IEA positive regulation of vesicle fusion
GO:0051592 IEA response to calcium ion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075830 syt3 synaptotagmin III protein_coding Danio_rerio
ENSG00000213023 SYT3 synaptotagmin III protein_coding Homo_sapiens

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