C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptotagmin III
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118962 Syt3-002 ENSMUSG00000030731 10090 + 7:44384102-44400029 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118962
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118962 1.428±0.29 3.110±1.08 1.339±0.03 10.334±6.21 1.252±0.63 0.973±0.34 0.839±0.18 2.256±0.69 0.575±0.60 0.864±0.35 0.518±0.26 1.268±0.54 0.045±0.01 0.378±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005515 IPI protein binding
GO:0008021 IEA synaptic vesicle
GO:0016020 IEA membrane
GO:0017156 IEA calcium ion-dependent exocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338916 SYT3-003 protein_coding Homo_sapiens 0 2379
ENST00000544769 SYT3-201 protein_coding Homo_sapiens 0 2379
ENST00000593901 SYT3-001 protein_coding Homo_sapiens 0 2379
ENST00000595117 SYT3-006 retained_intron Homo_sapiens 0 708
ENST00000598997 SYT3-005 protein_coding Homo_sapiens 0 448
ENST00000600079 SYT3-002 protein_coding Homo_sapiens 0 2459

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