C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin J
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119316 Ccnj-002 ENSMUSG00000025010 10090 + 19:40831308-40848009 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119316
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119316 0.813±0.20 1.749±0.39 0.626±0.14 1.991±0.40 1.661±0.45 0.624±0.25 0.731±0.12 0.495±0.21 0.373±0.16 1.384±0.09 0.291±0.00 1.094±0.41 0.497±0.23 0.318±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071R CIL_00071R_0003 CGP 19:40831279-40917947

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265992 CCNJ-003 protein_coding Homo_sapiens 0 688
ENST00000403870 CCNJ-004 protein_coding Homo_sapiens 0 688
ENST00000450600 CCNJP1-001 processed_pseudogene Homo_sapiens 0 1002
ENST00000465148 CCNJ-002 protein_coding Homo_sapiens 0 1286

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