C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 6877
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119347 Gm6877-001 ENSMUSG00000083557 10090 - 8:33191196-33192296 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119347
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119347 0.151±0.07 0.224±0.00 0.049±0.04 0.080±0.00 0.233±0.11 0.283±0.13 0.162±0.02 0.148±0.08 0.162±0.07 0.223±0.10 0.059±0.02 0.272±0.14 0.013±0.01 0.088±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KM CIL_0006KM_0002 CGP 8:31818028-33385527

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000222511 GTPBP10-001 protein_coding Homo_sapiens 0 1131
ENST00000257659 GTPBP10-002 protein_coding Homo_sapiens 0 640
ENST00000380058 GTPBP10-014 nonsense_mediated_decay Homo_sapiens 0 641
ENST00000417207 GTPBP10-013 protein_coding Homo_sapiens 0 477
ENST00000421719 GTPBP10-009 nonsense_mediated_decay Homo_sapiens 0 407
ENST00000426366 GTPBP10-008 protein_coding Homo_sapiens 0 704
ENST00000450619 GTPBP10-010 protein_coding Homo_sapiens 0 706
ENST00000474503 GTPBP10-005 processed_transcript Homo_sapiens 0 558

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