C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006KM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000068458-ENSDARG00000053065 CGP 7955 10:5882254-6153793
GeneTranscriptPositionBiotype
ENSDARG00000053065 (wrn)
Werner syndrome 		ENSDART00000074986 (wrn-201) 6081856-6153459 protein_coding
ENSDART00000136531 (wrn-001) 6081678-6153793 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0006KM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000062991-ENSMUSG00000031583 CGP 10090 8:31818028-33385527
GeneTranscriptPositionBiotype
ENSMUSG00000031583 (Wrn)
Werner syndrome homolog (human) 		ENSMUST00000033990 (Wrn-201) 33234384-33385527 protein_coding
ENSMUST00000033991 (Wrn-202) 33234384-33385527 protein_coding
ENSMUSG00000062991 (Nrg1)
neuregulin 1 		ENSMUST00000073884 (Nrg1-201) 31818028-31918203 protein_coding
ENSMUSG00000065950 (Gm5908)
predicted gene 5908 		ENSMUST00000084017 (Gm5908-201) 32476883-32477329 processed_pseudogene
ENSMUSG00000079070 (Gm3985)
predicted gene 3985 		ENSMUST00000132101 (Gm3985-001) 32888505-32950026 lincRNA
ENSMUST00000180220 (Gm3985-201) 32890475-32942482 lincRNA
ENSMUSG00000083557 (Gm6877)
predicted pseudogene 6877 		ENSMUST00000119347 (Gm6877-001) 33191196-33192296 processed_pseudogene
ENSMUSG00000097928 (Gm26578)
predicted gene, 26578 		ENSMUST00000181702 (Gm26578-201) 32008504-32015759 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006KM_0001ENSDARG00000053065ENSDART00000074986ENSDART00000136531CIL_0006KM_0002ENSMUSG00000031583ENSMUST00000033990ENSMUST00000033991ENSMUSG00000062991ENSMUST00000073884ENSMUSG00000065950ENSMUST00000084017ENSMUSG00000079070ENSMUST00000132101ENSMUST00000180220ENSMUSG00000083557ENSMUST00000119347ENSMUSG00000097928ENSMUST00000181702
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006KM_0001ENSDARG00000053065ENSDART00000074986ENSDART00000136531CIL_0006KM_0002ENSMUSG00000031583ENSMUST00000033990ENSMUST00000033991ENSMUSG00000062991ENSMUST00000073884ENSMUSG00000065950ENSMUST00000084017ENSMUSG00000079070ENSMUST00000132101ENSMUST00000180220ENSMUSG00000083557ENSMUST00000119347ENSMUSG00000097928ENSMUST00000181702
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000053065 ENSDART00000074986 N/A N/A N/A N/A N/A N/A 0.427±0.00 1.098±0.00 0.063±0.00 N/A 0.094±0.00 N/A N/A N/A
ENSDART00000136531 N/A N/A N/A N/A N/A N/A N/A 0.245±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031583 ENSMUST00000033990 1.498±0.36 N/A 1.177±0.32 0.903±0.00 1.140±0.38 0.962±0.05 0.457±0.04 0.962±0.25 1.989±1.71 0.882±0.29 0.312±0.04 1.177±0.46 1.167±0.20 2.144±0.91
ENSMUST00000033991 0.371±0.05 0.871±0.20 1.573±0.34 1.012±0.52 0.959±0.35 0.735±0.65 N/A 0.684±0.24 1.234±0.76 0.345±0.11 0.247±0.12 1.339±0.75 1.718±0.80 1.313±0.43
ENSMUSG00000062991 ENSMUST00000073884 2.072±0.49 0.159±0.07 N/A 3.108±0.59 0.068±0.03 1.043±0.53 0.166±0.05 0.748±0.31 0.097±0.08 0.373±0.16 0.017±0.00 0.468±0.20 0.162±0.07 0.269±0.00
ENSMUSG00000065950 ENSMUST00000084017 0.321±0.14 N/A 0.136±0.06 0.607±0.00 0.313±0.00 N/A N/A 0.118±0.00 0.149±0.07 0.126±0.00 N/A 0.587±0.35 0.651±0.94 0.270±0.00
ENSMUSG00000079070 ENSMUST00000132101 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A 0.055±0.04 N/A 0.040±0.02
ENSMUST00000180220 N/A N/A N/A 3.883±0.00 N/A N/A N/A 0.188±0.00 N/A N/A N/A 0.785±0.00 N/A 0.162±0.00
ENSMUSG00000083557 ENSMUST00000119347 0.151±0.07 0.224±0.00 0.049±0.04 0.080±0.00 0.233±0.11 0.283±0.13 0.162±0.02 0.148±0.08 0.162±0.07 0.223±0.10 0.059±0.02 0.272±0.14 0.013±0.01 0.088±0.04
ENSMUSG00000097928 ENSMUST00000181702 0.695±0.05 0.045±0.03 0.242±0.10 0.485±0.31 0.047±0.02 0.933±0.26 0.061±0.06 0.655±0.16 0.023±0.02 0.428±0.08 N/A 0.302±0.24 0.022±0.01 0.020±0.00

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