C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 4853
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119359 Gm4853-001 ENSMUSG00000081473 10090 + X:38396935-38397328 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119359
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119359 0.311±0.00 0.053±0.02 0.398±0.26 0.878±0.00 0.184±0.06 0.157±0.01 0.098±0.09 0.348±0.00 0.227±0.14 0.391±0.23 0.117±0.06 0.155±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016Y CIL_00016Y_0003 CGP X:38316184-38456454

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300688 ATP5L-001 protein_coding Homo_sapiens 0 407
ENST00000434169 ATP5LP4-001 processed_pseudogene Homo_sapiens 0 206
ENST00000440646 ATP5LP2-001 processed_pseudogene Homo_sapiens 0 327
ENST00000524422 ATP5L-006 protein_coding Homo_sapiens 0 189
ENST00000527186 ATP5L-007 retained_intron Homo_sapiens 0 403
ENST00000529460 ATP5L-002 processed_transcript Homo_sapiens 0 401
ENST00000529770 ATP5L-003 processed_transcript Homo_sapiens 0 403
ENST00000529790 ATP5L-008 retained_intron Homo_sapiens 0 403
ENST00000533172 ATP5L-004 processed_transcript Homo_sapiens 0 219
ENST00000534385 ATP5L-005 retained_intron Homo_sapiens 0 191
ENST00000560431 RP11-30K9.7-001 processed_pseudogene Homo_sapiens 0 219

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