C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12844
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119463 Gm12844-001 ENSMUSG00000084260 10090 - 4:117728718-117729299 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainLiverMuscleOvaryPlacentaTestisENSMUST00000119463
Transcript ID Adipose Bladder Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000119463 0.242±0.11 0.268±0.03 1.372±1.34 3.200±3.08 0.047±0.00 0.090±0.01 0.097±0.06 0.248±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SF CIL_0008SF_0002 VISTA 4:117346906-117947610
CIL_0009B8 CIL_0009B8_0002 VISTA 4:117528714-118131599

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000406314 RP11-40G16.1-001 processed_pseudogene Homo_sapiens 0 516
ENST00000418115 RHOA-001 protein_coding Homo_sapiens 0 870
ENST00000422781 RHOA-003 protein_coding Homo_sapiens 0 592
ENST00000431929 RHOA-006 protein_coding Homo_sapiens 0 243
ENST00000445425 RHOA-005 protein_coding Homo_sapiens 0 555
ENST00000454011 RHOA-004 protein_coding Homo_sapiens 0 473

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