C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12917
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119850 Gm12917-001 ENSMUSG00000083104 10090 + 4:124718999-124719637 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119850
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119850 0.693±0.11 0.779±0.22 0.442±0.02 0.735±0.12 1.506±0.36 0.881±0.26 0.178±0.08 0.531±0.13 0.497±0.25 0.934±0.08 0.169±0.06 1.518±0.50 0.409±0.15 0.215±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QK CIL_0007QK_0002 VISTA 4:124155077-124756356
CIL_0008ZP CIL_0008ZP_0002 VISTA 4:124158302-124761497
CIL_0007QI CIL_0007QI_0002 VISTA 4:124177456-124779254
CIL_000892 CIL_000892_0002 VISTA 4:124220131-124821365
CIL_0008EP CIL_0008EP_0002 VISTA 4:124226300-124827138
CIL_0008NZ CIL_0008NZ_0002 VISTA 4:124251046-124852185
CIL_0007UI CIL_0007UI_0002 VISTA 4:124315408-124916812
CIL_00095Y CIL_00095Y_0002 VISTA 4:124371949-124972943

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000403549 PRELID1P1-001 transcribed_processed_pseudogene Homo_sapiens 0 556
ENST00000431591 RP11-543B16.2-001 processed_pseudogene Homo_sapiens 0 564
ENST00000567272 PRELID1P1-002 processed_transcript Homo_sapiens 0 556

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