C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12115
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119969 Gm12115-001 ENSMUSG00000099902 10090 + 11:33172919-33173365 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastLiverMuscleOvaryPlacentaTestisENSMUST00000119969
Transcript ID Adipose Bladder Brain Breast Liver Muscle Ovary Placenta Testis
ENSMUST00000119969 0.124±0.00 0.026±0.00 1.382±0.00 0.276±0.00 0.020±0.00 0.109±0.00 0.133±0.09 0.102±0.00 1.701±1.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00092S CIL_00092S_0002 VISTA 11:32891798-33493112
CIL_00097F CIL_00097F_0002 VISTA 11:32999598-33601607
CIL_00088M CIL_00088M_0002 VISTA 11:33042866-33643782
CIL_000977 CIL_000977_0002 VISTA 11:33092412-33693558
CIL_00098H CIL_00098H_0002 VISTA 11:33099828-33701076
CIL_0008SG CIL_0008SG_0002 VISTA 11:33129906-33731024
CIL_0004OL CIL_0004OL_0002 CGP 11:33152287-33203589

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000404655 RP1-91J24.1-001 processed_pseudogene Homo_sapiens 6e-23 111
ENST00000445848 RP4-654C18.1-001 processed_pseudogene Homo_sapiens 0 331

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