C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: X Kell blood group precursor related family member 6 homolog
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119973 Xkr6-001 ENSMUSG00000035067 10090 + 14:63606503-63820809 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverLungOvaryPlacentaTestisENSMUST00000119973
Transcript ID Adipose Adrenal Brain Breast Colon Liver Lung Ovary Placenta Testis
ENSMUST00000119973 0.194±0.00 2.766±1.06 1.741±0.12 0.354±0.01 0.292±0.06 0.131±0.00 0.161±0.01 0.355±0.09 0.393±0.08 0.390±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Y4 CIL_0008Y4_0002 VISTA 14:63067789-63669845

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000063725 xkr6-001 protein_coding Danio_rerio 3e-17 95
ENSDART00000017244 XKR6 (1 of 2)-001 protein_coding Danio_rerio 0.00000000009 73
ENST00000297303 XKR6-003 protein_coding Homo_sapiens 0 1114
ENST00000382461 XKR6-001 protein_coding Homo_sapiens 0 2274
ENST00000416569 XKR6-002 protein_coding Homo_sapiens 0 3435
ENST00000529336 XKR6-004 nonsense_mediated_decay Homo_sapiens 0 390
ENST00000562532 XKR7-001 protein_coding Homo_sapiens 0 196

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