C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sterile alpha motif domain containing 9-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120087 Samd9l-001 ENSMUSG00000047735 10090 - 6:3372257-3399571 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120087
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120087 2.917±0.57 0.214±0.13 3.045±1.09 0.338±0.17 2.395±1.36 2.644±0.64 1.223±0.13 4.889±1.88 1.339±1.10 2.834±0.89 0.402±0.20 3.605±3.29 1.276±0.42 0.365±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008E8 CIL_0008E8_0002 VISTA 6:3209886-3814285
CIL_0006E0 CIL_0006E0_0002 CGP 6:3372257-3498297

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002244 IMP hematopoietic progenitor cell differentiation
GO:0003674 ND molecular_function
GO:0005769 IDA early endosome
GO:0017145 IMP stem cell division
GO:0034058 IMP endosomal vesicle fusion
GO:0035726 IMP common myeloid progenitor cell proliferation
GO:0042176 IMP regulation of protein catabolic process
GO:0048536 IMP spleen development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318238 SAMD9L-001 protein_coding Homo_sapiens 0 3413
ENST00000379958 SAMD9-001 protein_coding Homo_sapiens 0 804
ENST00000411955 SAMD9L-007 protein_coding Homo_sapiens 0 3413
ENST00000437805 SAMD9L-005 protein_coding Homo_sapiens 0 3413
ENST00000446617 SAMD9-002 protein_coding Homo_sapiens 0 804
ENST00000620985 SAMD9-201 protein_coding Homo_sapiens 0 804

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