C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15519
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120088 Gm15519-001 ENSMUSG00000083443 10090 + 6:112563642-112565207 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120088
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120088 3.263±2.42 0.401±0.20 0.058±0.02 0.097±0.00 1.122±0.47 0.180±0.08 0.130±0.09 0.137±0.03 0.399±0.31 0.274±0.04 0.091±0.05 0.480±0.25 0.055±0.02 0.275±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CT CIL_0003CT_0002 CGP 6:112473684-112696686

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000395449 ARFGAP2-006 processed_transcript Homo_sapiens 0 1323
ENST00000426335 ARFGAP2-201 protein_coding Homo_sapiens 0 1264
ENST00000524586 ARFGAP2-020 nonsense_mediated_decay Homo_sapiens 0 340
ENST00000524727 ARFGAP2-005 retained_intron Homo_sapiens 0 566
ENST00000524782 ARFGAP2-001 protein_coding Homo_sapiens 0 1823
ENST00000525314 ARFGAP2-015 protein_coding Homo_sapiens 0 682
ENST00000525398 ARFGAP2-023 protein_coding Homo_sapiens 0 566
ENST00000526185 ARFGAP2-003 retained_intron Homo_sapiens 0 339
ENST00000526948 ARFGAP2-025 retained_intron Homo_sapiens 0 244
ENST00000527097 ARFGAP2-022 retained_intron Homo_sapiens 0 769
ENST00000527776 ARFGAP2-027 protein_coding Homo_sapiens 0 673
ENST00000527927 ARFGAP2-017 protein_coding Homo_sapiens 0 647
ENST00000528444 ARFGAP2-002 protein_coding Homo_sapiens 0 566
ENST00000528708 ARFGAP2-010 nonsense_mediated_decay Homo_sapiens 0 462
ENST00000529439 ARFGAP2-009 nonsense_mediated_decay Homo_sapiens 0 405
ENST00000529455 ARFGAP2-019 nonsense_mediated_decay Homo_sapiens 0 564
ENST00000529599 ARFGAP2-013 processed_transcript Homo_sapiens 0 566
ENST00000530794 ARFGAP2-011 retained_intron Homo_sapiens 0 494
ENST00000531750 ARFGAP2-018 processed_transcript Homo_sapiens 0 566
ENST00000532438 ARFGAP2-014 nonsense_mediated_decay Homo_sapiens 0 573
ENST00000532478 ARFGAP2-016 nonsense_mediated_decay Homo_sapiens 0 728
ENST00000533243 ARFGAP2-007 nonsense_mediated_decay Homo_sapiens 0 1057
ENST00000533939 ARFGAP2-024 processed_transcript Homo_sapiens 0 562

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