C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA C530008M17 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120639 C530008M17Rik-002 ENSMUSG00000036377 10090 + 5:76840599-76873545 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120639
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120639 0.075±0.04 0.669±0.39 0.617±0.08 13.309±1.53 0.117±0.09 5.114±1.05 0.131±0.00 0.052±0.02 0.716±0.90 0.295±0.04 0.131±0.02 0.351±0.14 0.239±0.28 19.582±1.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084Q CIL_00084Q_0002 VISTA 5:76362343-76966797
CIL_00025G CIL_00025G_0002 CGP 5:76588698-76873554
CIL_0005R2 CIL_0005R2_0002 CGP 5:76656512-76905514

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264229 KIAA1211-002 protein_coding Homo_sapiens 0 1210
ENST00000366711 IBA57-001 protein_coding Homo_sapiens 0.0001 55
ENST00000484749 IBA57-002 processed_transcript Homo_sapiens 0.0002 55
ENST00000503618 KIAA1211-007 processed_transcript Homo_sapiens 0 281
ENST00000504228 KIAA1211-001 protein_coding Homo_sapiens 0 1476
ENST00000541073 KIAA1211-201 protein_coding Homo_sapiens 0 1437

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