C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 5 (neutral amino acid transporters, system A), member 4b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120757 Slc5a4b-001 ENSMUSG00000020226 10090 - 10:76057494-76110961 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120757
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120757 0.020±0.01 0.005±0.00 0.017±0.00 0.024±0.00 0.059±0.03 0.010±0.00 0.053±0.03 0.057±0.05 0.019±0.01 0.012±0.00 2.340±1.90 0.298±0.27 1.750±0.29

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005402 IDA cation:sugar symporter activity
GO:0006814 IDA sodium ion transport
GO:0008643 IDA carbohydrate transport
GO:0015758 IDA glucose transport
GO:0016021 IC integral component of membrane
GO:0034219 IDA carbohydrate transmembrane transport
GO:0098655 IDA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266086 SLC5A4-001 protein_coding Homo_sapiens 0 1568
ENST00000266088 SLC5A1-001 protein_coding Homo_sapiens 0 821
ENST00000477969 SLC5A1-002 retained_intron Homo_sapiens 0 477
ENST00000543737 SLC5A1-201 protein_coding Homo_sapiens 0 749

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