C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA C530008M17 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121160 C530008M17Rik-001 ENSMUSG00000036377 10090 + 5:76752368-76873330 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121160
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121160 0.134±0.09 0.765±0.00 0.391±0.00 11.640±4.99 0.159±0.00 2.483±0.75 0.264±0.06 0.017±0.00 1.788±0.92 0.339±0.04 0.346±0.05 0.565±0.31 0.318±0.17 21.726±9.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084Q CIL_00084Q_0002 VISTA 5:76362343-76966797
CIL_00025G CIL_00025G_0002 CGP 5:76588698-76873554
CIL_0005R2 CIL_0005R2_0002 CGP 5:76656512-76905514

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264229 KIAA1211-002 protein_coding Homo_sapiens 0 1245
ENST00000366711 IBA57-001 protein_coding Homo_sapiens 0.0001 55
ENST00000484749 IBA57-002 processed_transcript Homo_sapiens 0.0002 55
ENST00000503618 KIAA1211-007 processed_transcript Homo_sapiens 0 444
ENST00000504228 KIAA1211-001 protein_coding Homo_sapiens 0 1513
ENST00000541073 KIAA1211-201 protein_coding Homo_sapiens 0 1474

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