C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein SA, pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121462 Rpsa-ps5-001 ENSMUSG00000081695 10090 + 11:28956724-28957608 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverOvaryTestisENSMUST00000121462
Transcript ID Bladder Brain Breast Colon Heart Liver Ovary Testis
ENSMUST00000121462 3.637±3.63 2.043±0.01 0.096±0.08 0.135±0.00 0.033±0.00 2.262±2.75 0.161±0.00 0.515±0.25

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000416648 RPSAP31-001 transcribed_processed_pseudogene Homo_sapiens 0 662
ENST00000437188 AC074008.1-001 processed_pseudogene Homo_sapiens 0 582
ENST00000445165 RPSAP31-002 processed_transcript Homo_sapiens 0 318

Loading