C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000437188 AC074008.1-001 ENSG00000214484 9606 + 2:73370019-73370892 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainKidneyTestisENST00000437188
Transcript ID Adrenal Brain Kidney Testis
ENST00000437188 0.018±0.00 0.039±0.00 0.037±0.00 0.260±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003EB CIL_0003EB_0001 CGP 2:73290929-73610793

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057740 Rpsa-ps10-201 protein_coding Mus_musculus 0 774
ENSMUST00000035105 Rpsa-201 protein_coding Mus_musculus 0 763
ENSMUST00000121691 Rpsa-ps4-001 processed_pseudogene Mus_musculus 0 741
ENSMUST00000120702 Rpsa-ps9-001 processed_pseudogene Mus_musculus 0 739
ENSMUST00000120596 Rpsa-ps12-001 processed_pseudogene Mus_musculus 0 717
ENSMUST00000191040 Rpsa-ps1-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000120191 Gm11824-001 processed_pseudogene Mus_musculus 0 680
ENSMUST00000120423 Gm9083-001 processed_pseudogene Mus_musculus 0 675
ENSMUST00000117607 Gm9095-001 processed_pseudogene Mus_musculus 0 601
ENSMUST00000120514 Gm9097-001 processed_pseudogene Mus_musculus 0 595
ENSMUST00000121462 Rpsa-ps5-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000118817 Gm5764-001 processed_pseudogene Mus_musculus 0 577
ENSMUST00000120646 Gm7722-001 unprocessed_pseudogene Mus_musculus 0 479
ENSMUST00000117789 Rpsa-ps3-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000121121 Gm14666-001 processed_pseudogene Mus_musculus 0 243
ENSMUST00000162286 Gm16228-001 processed_pseudogene Mus_musculus 4.00001e-41 172

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