C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 5578
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121490 Gm5578-001 ENSMUSG00000029633 10090 + 6:112605544-112606779 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121490
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121490 1.516±0.87 0.246±0.12 0.060±0.04 0.143±0.08 0.650±0.11 0.231±0.11 0.103±0.07 0.193±0.19 0.118±0.06 0.224±0.13 0.052±0.03 0.492±0.30 0.042±0.02 0.207±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CT CIL_0003CT_0002 CGP 6:112473684-112696686

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340934 BROX-001 protein_coding Homo_sapiens 0 1327
ENST00000426638 BROX-005 protein_coding Homo_sapiens 0 713
ENST00000469236 BROX-004 processed_transcript Homo_sapiens 3.00004e-41 172
ENST00000473962 BROX-003 processed_transcript Homo_sapiens 0 359
ENST00000489191 BROX-006 processed_transcript Homo_sapiens 0 241
ENST00000537020 BROX-201 protein_coding Homo_sapiens 0 1040
ENST00000539697 BROX-202 protein_coding Homo_sapiens 0 839
ENST00000612948 BROX-203 protein_coding Homo_sapiens 0 839

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