C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 5843
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121631 Gm5843-001 ENSMUSG00000084092 10090 + 3:14722416-14729626 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverTestisENSMUST00000121631
Transcript ID Colon Liver Testis
ENSMUST00000121631 4.341±0.93 0.093±0.07 0.115±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006T1 CIL_0006T1_0002 CGP 3:14641727-14808368

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000431316 CA1-201 protein_coding Homo_sapiens 0 401
ENST00000517429 CA1-017 nonsense_mediated_decay Homo_sapiens 0 206
ENST00000517590 CA1-010 protein_coding Homo_sapiens 0 401
ENST00000517618 CA1-015 protein_coding Homo_sapiens 0 401
ENST00000518341 CA1-018 processed_transcript Homo_sapiens 0 353
ENST00000520093 CA1-016 retained_intron Homo_sapiens 0 206
ENST00000520990 CA1-009 retained_intron Homo_sapiens 0 206
ENST00000521846 CA1-004 protein_coding Homo_sapiens 0 355
ENST00000522579 CA1-006 protein_coding Homo_sapiens 0 353
ENST00000522662 CA1-014 protein_coding Homo_sapiens 0 267
ENST00000522814 CA1-013 protein_coding Homo_sapiens 0 350
ENST00000523022 CA1-003 protein_coding Homo_sapiens 0 401
ENST00000523858 CA1-005 protein_coding Homo_sapiens 0 248
ENST00000523953 CA1-001 protein_coding Homo_sapiens 0 401
ENST00000542576 CA1-202 protein_coding Homo_sapiens 0 401

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