C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6039
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121667 Gm6039-001 ENSMUSG00000083736 10090 + X:75233063-75234312 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000121667
Transcript ID Adipose Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121667 0.038±0.00 0.011±0.00 0.093±0.00 0.113±0.00 0.035±0.00 0.046±0.06 0.057±0.00 0.016±0.00 0.100±0.10 0.027±0.02 0.056±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000124168 ppp4r2b-201 protein_coding Danio_rerio 1.4013e-45 187
ENSDART00000075486 ppp4r2b-001 protein_coding Danio_rerio 1.4013e-45 187
ENST00000356692 PPP4R2-001 protein_coding Homo_sapiens 0 1260
ENST00000411669 AC024937.4-001 processed_pseudogene Homo_sapiens 0 1040
ENST00000429866 AC024937.6-001 processed_pseudogene Homo_sapiens 0 1024
ENST00000460360 PPP4R2-006 protein_coding Homo_sapiens 0 355
ENST00000470976 PPP4R2-004 retained_intron Homo_sapiens 0 617
ENST00000476505 PPP4R2-002 protein_coding Homo_sapiens 0 435
ENST00000482242 PPP4R2-003 nonsense_mediated_decay Homo_sapiens 0 257
ENST00000488810 PPP4R2-005 protein_coding Homo_sapiens 0 617
ENST00000504656 CTD-2083E4.5-001 processed_pseudogene Homo_sapiens 0 939
ENST00000507981 RP11-496H1.1-001 processed_pseudogene Homo_sapiens 0 909
ENST00000512270 CTD-2012J19.1-001 processed_pseudogene Homo_sapiens 0 691
ENST00000603917 RP11-141C7.3-001 processed_pseudogene Homo_sapiens 0 802

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