C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2Q (putative) 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121677 Ube2q2-004 ENSMUSG00000032307 10090 + 9:55149395-55206399 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121677
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121677 4.291±2.21 19.689±3.96 4.943±0.00 12.710±5.62 9.696±1.77 2.201±0.82 4.399±2.14 2.648±0.87 5.559±1.35 3.773±0.57 7.456±2.45 14.895±3.63 6.304±2.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024C CIL_00024C_0002 CGP 9:55148854-55224433

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008152 IEA metabolic process
GO:0016881 IEA acid-amino acid ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000124645 ube2q2-202 protein_coding Danio_rerio 0 531
ENSDART00000155676 ube2q2-002 protein_coding Danio_rerio 0 470
ENSDART00000155506 ube2q2-001 nonsense_mediated_decay Danio_rerio 0 381
ENST00000267938 UBE2Q2-001 protein_coding Homo_sapiens 0 1447
ENST00000339094 UBE2Q2P1-002 processed_transcript Homo_sapiens 1e-19 102
ENST00000354771 UBE2Q2P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 348
ENST00000426727 UBE2Q2-004 protein_coding Homo_sapiens 0 741
ENST00000473125 GOLGA8A-002 retained_intron Homo_sapiens 2e-36 159
ENST00000484716 GOLGA8B-002 retained_intron Homo_sapiens 2e-36 159
ENST00000490086 UBE2Q2P9-001 processed_pseudogene Homo_sapiens 3.00004e-41 171
ENST00000514854 UBE2Q2P10-001 processed_pseudogene Homo_sapiens 0 737
ENST00000559010 UBE2Q2P1-005 retained_intron Homo_sapiens 2e-16 90
ENST00000559958 UBE2Q2P1-006 processed_transcript Homo_sapiens 1e-21 106
ENST00000561723 UBE2Q2-008 nonsense_mediated_decay Homo_sapiens 0 427
ENST00000561851 UBE2Q2-003 protein_coding Homo_sapiens 0 1282
ENST00000562282 GOLGA8B-011 processed_transcript Homo_sapiens 2e-37 159
ENST00000562635 UBE2Q2-005 processed_transcript Homo_sapiens 6e-33 145
ENST00000563966 UBE2Q2-007 processed_transcript Homo_sapiens 0 582
ENST00000564575 GOLGA8B-006 processed_transcript Homo_sapiens 2e-38 163
ENST00000567921 UBE2Q2-006 nonsense_mediated_decay Homo_sapiens 0 309
ENST00000569100 GOLGA8B-004 retained_intron Homo_sapiens 2e-36 159
ENST00000569423 UBE2Q2-002 protein_coding Homo_sapiens 0 1919

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