C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5903
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121836 Gm5903-001 ENSMUSG00000082988 10090 - 7:130352038-130354362 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121836
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121836 0.704±0.37 0.324±0.12 0.079±0.02 0.350±0.20 0.401±0.13 0.359±0.24 0.210±0.12 0.143±0.06 0.177±0.07 0.320±0.06 0.020±0.00 1.220±0.61 0.123±0.10 0.314±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WI CIL_0002WI_0002 CGP 7:129591863-133123350
CIL_0007TN CIL_0007TN_0002 VISTA 7:129759548-130361335
CIL_00095T CIL_00095T_0002 VISTA 7:130125765-130727321
CIL_0001BE CIL_0001BE_0002 CGP 7:130162451-133123350

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361070 RFWD3-001 protein_coding Homo_sapiens 0 1306
ENST00000571750 RFWD3-002 protein_coding Homo_sapiens 0 1306
ENST00000572337 RFWD3-012 protein_coding Homo_sapiens 8e-22 108
ENST00000572610 RFWD3-004 retained_intron Homo_sapiens 0 233
ENST00000575154 RFWD3-005 retained_intron Homo_sapiens 0 459
ENST00000575281 RFWD3-006 retained_intron Homo_sapiens 0 383

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