C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: branched chain aminotransferase 1, cytosolic
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123930 Bcat1-004 ENSMUSG00000030268 10090 - 6:145019192-145047853 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverMuscleENSMUST00000123930
Transcript ID Liver Muscle
ENSMUST00000123930 0.100±0.00 0.106±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XB CIL_0004XB_0002 CGP 6:143828425-145076184
CIL_0008XB CIL_0008XB_0002 VISTA 6:144644642-145246014

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004084 IDA branched-chain-amino-acid transaminase activity
GO:0005739 IDA mitochondrion
GO:0005829 IDA cytosol
GO:0009083 IDA branched-chain amino acid catabolic process
GO:0031571 ISA mitotic G1 DNA damage checkpoint
GO:0034644 ISA cellular response to UV

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000538118 BCAT1-006 protein_coding Homo_sapiens 2e-16 94
ENST00000544418 BCAT1-005 processed_transcript Homo_sapiens 3e-21 108

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