C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium channel tetramerisation domain containing 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125212 Kctd9-004 ENSMUSG00000034327 10090 + 14:67716151-67729607 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLungOvaryPlacentaENSMUST00000125212
Transcript ID Heart Lung Ovary Placenta
ENSMUST00000125212 18.273±0.00 7.750±0.00 5.925±1.57 61.577±15.50

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000221200 KCTD9-001 protein_coding Homo_sapiens 0 442
ENST00000430462 KCTD9P1-001 transcribed_processed_pseudogene Homo_sapiens 0 379
ENST00000434597 KCTD9P3-001 processed_pseudogene Homo_sapiens 0 398
ENST00000504141 KCTD9P5-001 processed_pseudogene Homo_sapiens 0 387
ENST00000512203 KCTD9P2-001 processed_pseudogene Homo_sapiens 0 425
ENST00000518067 KCTD9-003 processed_transcript Homo_sapiens 0 189
ENST00000518997 KCTD9-002 processed_transcript Homo_sapiens 0 346
ENST00000519665 KCTD9-011 nonsense_mediated_decay Homo_sapiens 0 233
ENST00000520405 KCTD9-004 retained_intron Homo_sapiens 7e-35 150
ENST00000521458 KCTD9-008 retained_intron Homo_sapiens 0 346
ENST00000523140 KCTD9-009 nonsense_mediated_decay Homo_sapiens 0 189
ENST00000523294 KCTD9-006 retained_intron Homo_sapiens 0 189
ENST00000524217 KCTD9-010 processed_transcript Homo_sapiens 0 296
ENST00000526766 KCTD9P4-001 processed_pseudogene Homo_sapiens 0 425

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