C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8865
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125697 Gm8865-001 ENSMUSG00000086420 10090 - 14:54826247-54826676 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000125697
Transcript ID Adipose Bladder Brain Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000125697 0.215±0.11 5.641±5.61 0.435±0.00 0.139±0.05 0.817±1.02 0.151±0.00 0.157±0.00 0.279±0.12 1.389±0.00 0.477±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090C CIL_00090C_0002 VISTA 14:54638004-55241428
CIL_0009BW CIL_0009BW_0002 VISTA 14:54696106-55297707
CIL_0008Q4 CIL_0008Q4_0002 VISTA 14:54696894-55297224
CIL_0008QH CIL_0008QH_0002 VISTA 14:54703667-55304830

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000604586 RP11-416L21.2-001 processed_pseudogene Homo_sapiens 4e-33 145

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