C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aminoadipate-semialdehyde dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126741 Aasdh-002 ENSMUSG00000055923 10090 - 5:76875940-76905513 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonKidneyLiverOvaryENSMUST00000126741
Transcript ID Adipose Breast Colon Kidney Liver Ovary
ENSMUST00000126741 0.872±0.00 1.512±0.45 0.476±0.02 2.656±0.00 1.035±0.34 1.231±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084Q CIL_00084Q_0002 VISTA 5:76362343-76966797
CIL_0005R2 CIL_0005R2_0002 CGP 5:76656512-76905514
CIL_0008G9 CIL_0008G9_0002 VISTA 5:76829880-77430993
CIL_00025Q CIL_00025Q_0002 CGP 5:76873659-76951578

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003824 IEA catalytic activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000205214 AASDH-001 protein_coding Homo_sapiens 0 785
ENST00000451613 AASDH-201 protein_coding Homo_sapiens 0 337
ENST00000502617 AASDH-006 protein_coding Homo_sapiens 0 337
ENST00000503808 AASDH-003 nonsense_mediated_decay Homo_sapiens 0 337
ENST00000513376 AASDH-002 protein_coding Homo_sapiens 0 785
ENST00000514745 AASDH-004 nonsense_mediated_decay Homo_sapiens 0 785
ENST00000602986 AASDH-202 protein_coding Homo_sapiens 0 785

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