C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aminoadipate-semialdehyde dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000513376 AASDH-002 ENSG00000157426 9606 - 4:56338290-56387423 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyOvaryPlacentaTestisENST00000513376
Transcript ID Brain Colon Kidney Ovary Placenta Testis
ENST00000513376 0.840±0.00 0.203±0.00 0.501±0.00 2.196±0.00 0.693±0.48 1.733±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084Q CIL_00084Q_0001 VISTA 4:55753423-56357627
CIL_0005R2 CIL_0005R2_0001 CGP 4:56170195-56387508
CIL_00025Q CIL_00025Q_0001 CGP 4:56338287-56435615

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005524 IEA ATP binding
GO:0006631 ISS fatty acid metabolic process
GO:0008152 IEA metabolic process
GO:0016878 ISS acid-thiol ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000069709 Aasdh-201 protein_coding Mus_musculus 0 1123
ENSMUST00000120963 Aasdh-001 protein_coding Mus_musculus 0 1123
ENSMUST00000146570 Aasdh-004 protein_coding Mus_musculus 0 1114
ENSMUST00000123682 Aasdh-006 nonsense_mediated_decay Mus_musculus 0 996
ENSMUST00000126741 Aasdh-002 nonsense_mediated_decay Mus_musculus 0 785
ENSMUST00000135697 Aasdh-005 retained_intron Mus_musculus 0 424
ENSMUST00000149602 Aasdh-012 protein_coding Mus_musculus 0 418
ENSMUST00000123059 Aasdh-011 retained_intron Mus_musculus 0 204

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