C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: multiple EGF-like-domains 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127088 Megf6-003 ENSMUSG00000057751 10090 + 4:154264615-154275184 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000127088
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000127088 0.946±0.04 0.808±0.29 0.728±0.01 1.147±0.70 0.681±0.33 0.749±0.37 0.449±0.04 0.101±0.04 0.283±0.08 7.478±1.52 0.077±0.01 2.318±1.04 1.045±0.76 0.081±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099V CIL_00099V_0002 VISTA 4:154093365-154697126
CIL_0007TB CIL_0007TB_0002 VISTA 4:154156294-154757167

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294599 MEGF6-001 protein_coding Homo_sapiens 4e-23 115
ENST00000356575 MEGF6-007 protein_coding Homo_sapiens 0 612
ENST00000485002 MEGF6-002 nonsense_mediated_decay Homo_sapiens 0 1471

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