C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: multiple EGF-like-domains 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000057751 Megf6 10090 + 4:154170730-154275713 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030897 Megf6-001 154170730-154275713 protein_coding
  ENSMUST00000127088 Megf6-003 154264615-154275184 processed_transcript
  ENSMUST00000128700 Megf6-004 154266171-154270530 protein_coding
  ENSMUST00000138945 Megf6-005 154269786-154274128 retained_intron
  ENSMUST00000142110 Megf6-006 154269881-154271028 retained_intron
  ENSMUST00000152159 Megf6-002 154237525-154271739 protein_coding
  ENSMUST00000183595 Megf6-007 154249296-154252217 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030897ENSMUST00000127088ENSMUST00000128700ENSMUST00000138945ENSMUST00000152159
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030897 0.985±0.40 0.691±0.35 1.009±0.07 2.426±1.13 0.363±0.23 1.100±0.34 0.962±0.25 0.116±0.06 0.237±0.06 4.833±0.41 0.123±0.02 3.306±2.26 0.629±0.29 0.117±0.01
ENSMUST00000127088 0.946±0.04 0.808±0.29 0.728±0.01 1.147±0.70 0.681±0.33 0.749±0.37 0.449±0.04 0.101±0.04 0.283±0.08 7.478±1.52 0.077±0.01 2.318±1.04 1.045±0.76 0.081±0.05
ENSMUST00000128700 N/A N/A N/A N/A N/A N/A N/A N/A 0.219±0.00 N/A N/A N/A N/A N/A
ENSMUST00000138945 N/A 1.595±0.00 3.278±0.00 N/A N/A 1.471±0.00 N/A 0.255±0.00 0.387±0.10 N/A 0.337±0.06 6.294±0.56 3.545±2.32 0.527±0.00
ENSMUST00000152159 N/A N/A N/A 0.702±0.00 0.425±0.00 N/A N/A 0.054±0.00 N/A N/A 0.060±0.03 N/A 1.940±0.58 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099V CIL_00099V_0002 VISTA 4:154093365-154697126
CIL_0007TB CIL_0007TB_0002 VISTA 4:154156294-154757167

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079199 megf6a multiple EGF-like-domains 6a protein_coding Danio_rerio
ENSG00000162591 MEGF6 multiple EGF-like-domains 6 protein_coding Homo_sapiens

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