C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin light chain, phosphorylatable, fast skeletal muscle
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127710 Mylpf-002 ENSMUSG00000030672 10090 + 7:127212679-127213487 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartLiverOvaryPlacentaTestisENSMUST00000127710
Transcript ID Adipose Brain Colon Heart Liver Ovary Placenta Testis
ENSMUST00000127710 0.357±0.00 1.406±0.00 0.936±0.29 0.362±0.13 0.419±0.27 3.185±2.29 14.031±0.00 1.324±1.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003V7 CIL_0003V7_0003 CGP 7:127197465-127214298

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000400159 MYL5-001 protein_coding Homo_sapiens 5e-29 132
ENST00000503300 MYL5-003 nonsense_mediated_decay Homo_sapiens 7e-22 110
ENST00000505477 MYL5-009 protein_coding Homo_sapiens 5e-29 132
ENST00000506838 MYL5-002 protein_coding Homo_sapiens 2e-28 132
ENST00000507804 MYL5-008 protein_coding Homo_sapiens 7e-29 132
ENST00000511290 MYL5-004 protein_coding Homo_sapiens 6e-29 132
ENST00000513662 MYL5-007 nonsense_mediated_decay Homo_sapiens 3e-22 110

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