C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-CoA synthetase long-chain family member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127731 Acsl6-009 ENSMUSG00000020333 10090 + 11:54335497-54361539 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaENSMUST00000127731
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000127731 0.067±0.01 0.166±0.03 4.928±0.00 0.078±0.07 0.090±0.04 0.022±0.01 0.093±0.07 0.015±0.00 0.054±0.02 0.012±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RF CIL_0007RF_0002 VISTA 11:53756663-54359415
CIL_00093D CIL_00093D_0002 VISTA 11:53760072-54361368

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000084838 acsl6-201 protein_coding Danio_rerio 0 409
ENST00000296869 ACSL6-009 protein_coding Homo_sapiens 0 1628
ENST00000357096 ACSL6-201 protein_coding Homo_sapiens 0 1572
ENST00000379240 ACSL6-004 protein_coding Homo_sapiens 0 1591
ENST00000379244 ACSL6-008 protein_coding Homo_sapiens 0 1618
ENST00000379246 ACSL6-002 protein_coding Homo_sapiens 0 1624
ENST00000379255 ACSL6-003 protein_coding Homo_sapiens 0 1572
ENST00000379264 ACSL6-001 protein_coding Homo_sapiens 0 1631
ENST00000413683 ACSL6-006 nonsense_mediated_decay Homo_sapiens 0 1177
ENST00000431707 ACSL6-018 protein_coding Homo_sapiens 0 1371
ENST00000434099 ACSL6-005 protein_coding Homo_sapiens 0 272
ENST00000484870 ACSL6-022 retained_intron Homo_sapiens 0 460
ENST00000493861 ACSL6-010 retained_intron Homo_sapiens 0 1692
ENST00000543479 ACSL6-202 protein_coding Homo_sapiens 0 1371

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