C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: acyl-CoA synthetase long-chain family member 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020333 Acsl6 10090 + 11:54303798-54364756 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000000145 Acsl6-006 54304005-54361535 protein_coding
  ENSMUST00000064690 Acsl6-004 54314988-54337728 protein_coding
  ENSMUST00000072178 Acsl6-001 54314896-54361197 protein_coding
  ENSMUST00000093106 Acsl6-003 54303798-54364756 protein_coding
  ENSMUST00000094194 Acsl6-010 54319856-54361501 protein_coding
  ENSMUST00000101211 Acsl6-011 54314936-54361535 protein_coding
  ENSMUST00000101213 Acsl6-012 54314936-54361535 protein_coding
  ENSMUST00000108899 Acsl6-005 54314988-54339287 protein_coding
  ENSMUST00000108904 Acsl6-002 54304202-54361539 protein_coding
  ENSMUST00000108905 Acsl6-008 54304202-54364752 protein_coding
  ENSMUST00000127731 Acsl6-009 54335497-54361539 processed_transcript
  ENSMUST00000138515 Acsl6-014 54304022-54325660 protein_coding
  ENSMUST00000139484 Acsl6-013 54345888-54361528 protein_coding
  ENSMUST00000149403 Acsl6-015 54313677-54325107 protein_coding
  ENSMUST00000156252 Acsl6-007 54320152-54339071 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000000145ENSMUST00000064690ENSMUST00000072178ENSMUST00000093106ENSMUST00000094194ENSMUST00000101213ENSMUST00000108899ENSMUST00000108904ENSMUST00000108905ENSMUST00000127731ENSMUST00000138515ENSMUST00000149403ENSMUST00000156252
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000000145 N/A N/A N/A 52.829±0.00 N/A N/A N/A 0.053±0.00 0.046±0.00 N/A N/A N/A 0.016±0.00 19.868±0.00
ENSMUST00000064690 N/A 0.220±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000072178 N/A N/A N/A 58.092±0.00 N/A 0.136±0.00 0.764±0.16 N/A 0.360±0.11 N/A N/A 0.208±0.00 0.099±0.06 33.038±0.00
ENSMUST00000093106 0.060±0.06 0.255±0.00 N/A 8.533±0.38 0.163±0.00 0.116±0.03 0.327±0.11 0.028±0.01 N/A 0.018±0.00 N/A 0.128±0.06 0.005±0.00 N/A
ENSMUST00000094194 N/A 0.227±0.07 N/A N/A N/A N/A 1.252±0.20 0.056±0.01 0.176±0.09 0.085±0.05 7.956±0.86 0.115±0.00 0.047±0.01 24.425±0.67
ENSMUST00000101213 N/A N/A N/A N/A N/A N/A N/A N/A 0.289±0.11 0.098±0.00 N/A N/A N/A N/A
ENSMUST00000108899 N/A 0.284±0.08 N/A N/A 0.096±0.00 0.359±0.05 N/A N/A N/A N/A N/A 0.380±0.09 N/A N/A
ENSMUST00000108904 0.253±0.05 0.446±0.19 0.246±0.01 N/A 0.483±0.00 0.194±0.11 0.522±0.00 0.051±0.00 N/A 0.061±0.03 N/A 0.219±0.07 0.010±0.00 14.833±1.14
ENSMUST00000108905 0.008±0.00 0.283±0.08 0.056±0.01 6.398±0.90 N/A 0.121±0.03 0.468±0.18 0.023±0.00 N/A 0.071±0.01 2.068±0.18 0.019±0.00 N/A N/A
ENSMUST00000127731 0.067±0.01 0.166±0.03 N/A 4.928±0.00 0.078±0.07 0.090±0.04 N/A 0.022±0.01 0.093±0.07 0.015±0.00 N/A 0.054±0.02 0.012±0.01 N/A
ENSMUST00000138515 0.044±0.00 N/A N/A N/A N/A N/A N/A 0.105±0.00 N/A N/A N/A 0.290±0.08 0.115±0.03 N/A
ENSMUST00000149403 N/A 0.670±0.00 N/A N/A N/A 0.956±0.40 N/A 0.277±0.09 N/A 0.140±0.00 N/A N/A N/A N/A
ENSMUST00000156252 0.173±0.16 0.565±0.00 N/A N/A 0.071±0.02 0.355±0.02 N/A N/A N/A N/A N/A 0.531±0.23 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RF CIL_0007RF_0002 VISTA 11:53756663-54359415
CIL_00093D CIL_00093D_0002 VISTA 11:53760072-54361368

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001666 IEA response to hypoxia
GO:0001676 IDA long-chain fatty acid metabolic process
GO:0004467 IDA long-chain fatty acid-CoA ligase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0005741 IEA mitochondrial outer membrane
GO:0005777 IEA peroxisome
GO:0005783 IEA endoplasmic reticulum
GO:0006641 IEA triglyceride metabolic process
GO:0007405 IDA neuroblast proliferation
GO:0007584 IEA response to nutrient
GO:0008654 IEA phospholipid biosynthetic process
GO:0009629 IEA response to gravity
GO:0010747 IEA positive regulation of plasma membrane long-chain fatty acid transport
GO:0010867 IEA positive regulation of triglyceride biosynthetic process
GO:0010976 IEA positive regulation of neuron projection development
GO:0015908 IEA fatty acid transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0019899 IEA enzyme binding
GO:0032869 IEA cellular response to insulin stimulus
GO:0042803 IEA protein homodimerization activity
GO:0048545 IEA response to steroid hormone
GO:0048666 IEA neuron development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060317 acsl6 acyl-CoA synthetase long-chain family member 6 protein_coding Danio_rerio
ENSG00000164398 ACSL6 acyl-CoA synthetase long-chain family member 6 protein_coding Homo_sapiens

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