C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TLR4 interactor with leucine-rich repeats
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127748 Tril-001 ENSMUSG00000043496 10090 - 6:53815466-53820830 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000127748
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000127748 8.364±1.32 6.857±1.30 4.943±0.07 4.200±0.78 9.463±3.48 5.064±0.58 1.904±0.17 8.372±0.57 0.142±0.05 13.175±0.78 0.595±0.13 16.492±6.16 0.752±0.42 0.226±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZK CIL_0003ZK_0002 CGP 6:53573384-53820830

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001530 IEA lipopolysaccharide binding
GO:0002718 IEA regulation of cytokine production involved in immune response
GO:0006954 IEA inflammatory response
GO:0034142 IEA toll-like receptor 4 signaling pathway
GO:0045087 IEA innate immune response
GO:0046696 IEA lipopolysaccharide receptor complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000539664 TRIL-001 protein_coding Homo_sapiens 0 2639

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