C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TLR4 interactor with leucine-rich repeats
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000539664 TRIL-001 ENSG00000255690 9606 - 7:28953358-28958292 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000539664
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000539664 1.084±0.00 2.095±0.00 0.840±0.00 17.116±10.18 2.512±1.47 0.529±0.04 0.380±0.08 0.093±0.00 0.694±0.65 0.477±0.27 0.605±0.08 2.047±0.67 1.421±0.49 0.654±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZK CIL_0003ZK_0001 CGP 7:28299321-28958292

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001530 IDA lipopolysaccharide binding
GO:0002718 IDA regulation of cytokine production involved in immune response
GO:0005515 IEA protein binding
GO:0006954 IEA inflammatory response
GO:0034142 IDA toll-like receptor 4 signaling pathway
GO:0045087 IEA innate immune response
GO:0046696 IDA lipopolysaccharide receptor complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000127748 Tril-001 protein_coding Mus_musculus 0 2639
ENSMUST00000104970 Gm16499-201 protein_coding Mus_musculus 2e-20 106

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