C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: thioredoxin domain containing 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128648 Txndc17-002 ENSMUSG00000020803 10090 + 11:72207615-72208677 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryTestisENSMUST00000128648
Transcript ID Brain Ovary Testis
ENSMUST00000128648 3.453±0.00 7.754±0.00 1.924±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001B4 CIL_0001B4_0002 CGP 11:72153929-72210015
CIL_0000HF CIL_0000HF_0002 CGP 11:72207547-72215592

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000250101 TXNDC17-001 protein_coding Homo_sapiens 0 198
ENST00000570330 TXNDC17-010 protein_coding Homo_sapiens 2e-17 94
ENST00000571029 TXNDC17-009 processed_transcript Homo_sapiens 1e-18 97
ENST00000571957 TXNDC17-005 processed_transcript Homo_sapiens 0 198
ENST00000573792 TXNDC17-008 processed_transcript Homo_sapiens 5e-18 95
ENST00000574429 TXNDC17-002 retained_intron Homo_sapiens 3e-21 108
ENST00000574734 TXNDC17-004 nonsense_mediated_decay Homo_sapiens 0 209
ENST00000574838 TXNDC17-006 protein_coding Homo_sapiens 0 198
ENST00000576020 TXNDC17-003 processed_transcript Homo_sapiens 4e-18 95
ENST00000577146 TXNDC17-007 processed_transcript Homo_sapiens 2e-17 94

Loading