C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oxidative-stress responsive 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128880 Oxsr1-002 ENSMUSG00000036737 10090 - 9:119240670-119322322 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverOvaryENSMUST00000128880
Transcript ID Adrenal Breast Colon Liver Ovary
ENSMUST00000128880 4.038±2.26 3.529±0.58 2.945±0.61 1.146±0.00 3.419±0.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028C CIL_00028C_0002 CGP 9:119193002-119322427
CIL_0008BE CIL_0008BE_0002 VISTA 9:119196374-119798584
CIL_000131 CIL_000131_0002 CGP 9:119238432-119341411

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000147004 oxsr1b-001 protein_coding Danio_rerio 0 305
ENSDART00000047073 oxsr1a-001 protein_coding Danio_rerio 0 270
ENSDART00000153918 oxsr1a-002 protein_coding Danio_rerio 0 202
ENST00000311806 OXSR1-001 protein_coding Homo_sapiens 0 1978
ENST00000426620 OXSR1-002 nonsense_mediated_decay Homo_sapiens 0 1511
ENST00000446845 OXSR1-004 protein_coding Homo_sapiens 0 1351
ENST00000467900 OXSR1-006 retained_intron Homo_sapiens 0 490
ENST00000483695 OXSR1-003 retained_intron Homo_sapiens 0 577

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