C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ring finger protein 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128954 Rnf10-007 ENSMUSG00000041740 10090 - 5:115243692-115246075 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZA CIL_0007ZA_0002 VISTA 5:114966986-115567561
CIL_0009CQ CIL_0009CQ_0002 VISTA 5:115188390-115791906

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325954 RNF10-001 protein_coding Homo_sapiens 0 377
ENST00000366112 RNF10-010 retained_intron Homo_sapiens 0 379
ENST00000413266 RNF10-002 protein_coding Homo_sapiens 0 377
ENST00000535470 RNF10-014 processed_transcript Homo_sapiens 0 215
ENST00000538254 RNF10-029 protein_coding Homo_sapiens 5e-39 165
ENST00000540046 RNF10-020 protein_coding Homo_sapiens 5e-39 165
ENST00000545419 RNF10-009 nonsense_mediated_decay Homo_sapiens 0 379

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