C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Kruppel-like factor 4 (gut)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129250 Klf4-003 ENSMUSG00000003032 10090 - 4:55530603-55531770 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000225 CIL_000225_0003 CGP 4:55350043-55532466
CIL_0001JU CIL_0001JU_0002 CGP 4:55527143-56741443

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 ISS DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0008285 IDA negative regulation of cell proliferation
GO:0009913 IMP epidermal cell differentiation
GO:0010033 IDA response to organic substance
GO:0019827 IDA stem cell maintenance
GO:0030154 IMP cell differentiation
GO:0031077 IMP post-embryonic camera-type eye development
GO:0032526 IDA response to retinoic acid
GO:0042127 IGI regulation of cell proliferation
GO:0043565 IDA sequence-specific DNA binding
GO:0045444 IMP fat cell differentiation
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048730 IMP epidermis morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374672 KLF4-002 protein_coding Homo_sapiens 0 584
ENST00000411706 KLF4-004 protein_coding Homo_sapiens 0 590
ENST00000420475 KLF4-006 protein_coding Homo_sapiens 5e-20 102
ENST00000493306 KLF4-003 retained_intron Homo_sapiens 0 584
ENST00000497048 KLF4-001 retained_intron Homo_sapiens 0 390
ENST00000610832 KLF4-201 protein_coding Homo_sapiens 0 196

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