C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001JU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136826-ENSG00000148156 CGP 9606 9:107484852-108856967
GeneTranscriptPositionBiotype
ENSG00000136826 (KLF4)
Kruppel-like factor 4 (gut) 		ENST00000374672 (KLF4-002) 107484852-107489646 protein_coding
ENST00000411706 (KLF4-004) 107487669-107489130 protein_coding
ENST00000420475 (KLF4-006) 107488989-107490482 protein_coding
ENST00000493306 (KLF4-003) 107484852-107489437 retained_intron
ENST00000497048 (KLF4-001) 107484852-107488447 retained_intron
ENST00000610832 (KLF4-201) 107484854-107489766 protein_coding
ENSG00000148156 (ACTL7B)
actin-like 7B 		ENST00000374667 (ACTL7B-001) 108854589-108856967 protein_coding
ENSG00000169253 (RP11-220D10.1)
 ENST00000306634 (RP11-220D10.1-001) 108626833-108627150 processed_pseudogene
ENSG00000213557 (RP11-240E2.2)
 ENST00000394891 (RP11-240E2.2-001) 108040213-108040592 processed_pseudogene
ENSG00000227350 (RP11-438P9.2)
 ENST00000422463 (RP11-438P9.2-001) 107543151-107543616 processed_pseudogene
ENSG00000230030 (RP11-505C13.1)
 ENST00000453455 (RP11-505C13.1-001) 108252154-108254820 lincRNA
ENSG00000231810 (RPL36AP35)
ribosomal protein L36a pseudogene 35 		ENST00000426082 (RPL36AP35-001) 108821697-108822004 processed_pseudogene
ENSG00000236005 (RP11-438P9.1)
 ENST00000454576 (RP11-438P9.1-001) 107534390-107535162 processed_pseudogene
ENSG00000237360 (CHCHD4P2)
coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 2 		ENST00000431135 (CHCHD4P2-001) 108097432-108097851 processed_pseudogene
ENSG00000244104 (RN7SL659P)
RNA, 7SL, cytoplasmic 659, pseudogene 		ENST00000483093 (RN7SL659P-201) 107811616-107811914 misc_RNA
CIL_0001JU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000003032-ENSMUSG00000070980 CGP 10090 4:55527143-56741443
GeneTranscriptPositionBiotype
ENSMUSG00000003032 (Klf4)
Kruppel-like factor 4 (gut) 		ENSMUST00000107619 (Klf4-001) 55527143-55532466 protein_coding
ENSMUST00000129250 (Klf4-003) 55530603-55531770 protein_coding
ENSMUST00000132746 (Klf4-002) 55530712-55532453 protein_coding
ENSMUSG00000066176 (Gm12511)
predicted gene 12511 		ENSMUST00000135987 (Gm12511-001) 55563265-55599296 lincRNA
ENSMUSG00000070980 (Actl7b)
actin-like 7b 		ENSMUST00000095080 (Actl7b-001) 56740005-56741443 protein_coding
ENSMUSG00000082613 (Gm12518)
predicted gene 12518 		ENSMUST00000122075 (Gm12518-001) 56387802-56388580 processed_pseudogene
ENSMUSG00000085020 (2310081O03Rik)
RIKEN cDNA 2310081O03 gene 		ENSMUST00000128591 (2310081O03Rik-001) 56220617-56224521 lincRNA
ENSMUSG00000085375 (Gm12506)
predicted gene 12506 		ENSMUST00000123620 (Gm12506-001) 55605149-55636901 lincRNA
ENSMUSG00000085643 (Gm12519)
predicted gene 12519 		ENSMUST00000134099 (Gm12519-001) 55969023-55993739 lincRNA
ENSMUSG00000096930 (Gm26657)
predicted gene, 26657 		ENSMUST00000181745 (Gm26657-201) 56740070-56741377 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001JU_0001ENSG00000136826ENST00000374672ENST00000411706ENST00000420475ENST00000493306ENST00000497048ENST00000610832ENSG00000148156ENST00000374667ENSG00000169253ENST00000306634ENSG00000213557ENST00000394891ENSG00000227350ENST00000422463ENSG00000230030ENST00000453455ENSG00000231810ENST00000426082ENSG00000236005ENST00000454576ENSG00000237360ENST00000431135ENSG00000244104ENST00000483093CIL_0001JU_0002ENSMUSG00000003032ENSMUST00000107619ENSMUST00000129250ENSMUST00000132746ENSMUSG00000066176ENSMUST00000135987ENSMUSG00000070980ENSMUST00000095080ENSMUSG00000082613ENSMUST00000122075ENSMUSG00000085020ENSMUST00000128591ENSMUSG00000085375ENSMUST00000123620ENSMUSG00000085643ENSMUST00000134099ENSMUSG00000096930ENSMUST00000181745
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001JU_0001ENSG00000136826ENST00000374672ENST00000420475ENST00000493306ENST00000497048ENST00000610832ENSG00000148156ENST00000374667ENSG00000169253ENST00000306634ENSG00000213557ENST00000394891ENSG00000227350ENST00000422463ENSG00000230030ENST00000453455ENSG00000231810ENST00000426082ENSG00000236005ENST00000454576ENSG00000237360ENST00000431135ENSG00000244104ENST00000483093CIL_0001JU_0002ENSMUSG00000003032ENSMUST00000107619ENSMUSG00000066176ENSMUST00000135987ENSMUSG00000070980ENSMUST00000095080ENSMUSG00000082613ENSMUST00000122075ENSMUSG00000085020ENSMUST00000128591ENSMUSG00000085375ENSMUST00000123620ENSMUSG00000085643ENSMUST00000134099ENSMUSG00000096930ENSMUST00000181745
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136826 ENST00000374672 19.125±0.00 6.307±0.00 N/A N/A N/A N/A 8.266±0.00 N/A 1.374±0.71 22.094±0.00 8.292±0.00 13.204±4.84 15.123±6.12 5.715±1.09
ENST00000411706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.591±0.00 N/A
ENST00000493306 N/A N/A N/A 1.099±0.00 N/A N/A 0.584±0.00 N/A N/A N/A N/A 5.367±3.33 N/A N/A
ENST00000497048 14.232±0.00 6.703±0.00 2.243±0.00 1.290±0.00 8.110±4.37 11.165±7.57 0.381±0.00 0.845±0.00 2.150±0.27 7.846±3.37 N/A 14.082±12.03 5.056±0.00 6.117±0.00
ENST00000610832 N/A N/A N/A 0.632±0.00 5.811±2.82 4.444±0.00 N/A 0.987±0.37 N/A 3.536±0.00 N/A 10.702±0.00 N/A N/A
ENSG00000148156 ENST00000374667 0.047±0.00 0.089±0.00 N/A N/A 0.054±0.00 0.010±0.00 0.060±0.00 N/A N/A N/A N/A 0.021±0.00 N/A 39.855±1.00
ENSG00000169253 ENST00000306634 N/A 0.162±0.00 N/A N/A N/A 0.081±0.00 N/A N/A 0.076±0.00 0.261±0.00 N/A N/A N/A 0.401±0.03
ENSG00000213557 ENST00000394891 N/A N/A N/A N/A N/A 0.653±0.00 N/A N/A N/A N/A N/A N/A N/A 0.048±0.02
ENSG00000227350 ENST00000422463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.065±0.00
ENSG00000230030 ENST00000453455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.255±0.00
ENSG00000231810 ENST00000426082 N/A N/A N/A 0.141±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000236005 ENST00000454576 N/A 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A 0.073±0.00 N/A N/A N/A 0.064±0.03
ENSG00000237360 ENST00000431135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 0.068±0.00 0.070±0.00
ENSG00000244104 ENST00000483093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.106±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003032 ENSMUST00000107619 15.088±2.14 5.467±1.03 26.407±0.23 0.912±0.51 16.905±7.54 162.562±41.67 7.912±2.16 3.007±0.70 0.447±0.25 35.087±3.61 4.446±0.68 5.971±2.48 9.815±9.11 34.769±18.68
ENSMUST00000129250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000066176 ENSMUST00000135987 0.050±0.02 N/A 0.043±0.00 0.026±0.01 N/A 0.295±0.06 N/A 0.034±0.01 0.007±0.00 0.027±0.00 0.014±0.00 0.057±0.05 0.012±0.01 0.021±0.00
ENSMUSG00000070980 ENSMUST00000095080 0.023±0.00 N/A N/A 0.011±0.00 N/A N/A N/A N/A 0.006±0.00 N/A N/A 0.042±0.01 N/A 31.502±0.00
ENSMUSG00000082613 ENSMUST00000122075 0.089±0.04 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.044±0.00
ENSMUSG00000085020 ENSMUST00000128591 0.225±0.15 N/A 0.012±0.00 0.021±0.01 0.129±0.00 0.197±0.07 N/A 0.061±0.00 N/A 0.196±0.04 0.053±0.00 N/A 0.057±0.00 0.241±0.19
ENSMUSG00000085375 ENSMUST00000123620 N/A N/A 0.012±0.00 0.075±0.00 N/A 1.200±0.00 N/A N/A N/A 0.162±0.06 0.068±0.00 N/A 0.015±0.01 0.381±0.00
ENSMUSG00000085643 ENSMUST00000134099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00 0.029±0.00
ENSMUSG00000096930 ENSMUST00000181745 0.050±0.01 N/A 0.018±0.01 0.097±0.00 0.101±0.01 0.049±0.02 0.274±0.07 0.157±0.07 0.018±0.01 0.125±0.03 N/A 0.108±0.04 0.009±0.00 540.550±205.51

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