C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: canopy 4 homolog (zebrafish)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130126 Cnpy4-003 ENSMUSG00000036968 10090 + 5:138190112-138192151 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonOvaryENSMUST00000130126
Transcript ID Adrenal Colon Ovary
ENSMUST00000130126 0.457±0.15 0.713±0.15 1.665±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0002 VISTA 5:137705744-138314172
CIL_0005LJ CIL_0005LJ_0002 CGP 5:138178617-138193918
CIL_0003FP CIL_0003FP_0002 CGP 5:138187485-138195621

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262932 CNPY4-001 protein_coding Homo_sapiens 0 390
ENST00000462193 CNPY4-002 retained_intron Homo_sapiens 0 388
ENST00000480692 CNPY4-003 processed_transcript Homo_sapiens 0 394
ENST00000483756 CNPY4-005 processed_transcript Homo_sapiens 0 388

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