C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Meckel syndrome, type 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130135 Mks1-004 ENSMUSG00000034121 10090 + 11:87853227-87859313 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverLungMuscleOvaryPlacentaTestisENSMUST00000130135
Transcript ID Bladder Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000130135 1.882±0.00 0.320±0.05 1.308±0.00 0.351±0.05 2.121±0.70 0.904±0.14 0.670±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313863 MKS1-002 protein_coding Homo_sapiens 0 965
ENST00000393119 MKS1-003 protein_coding Homo_sapiens 0 985
ENST00000393120 MKS1-004 nonsense_mediated_decay Homo_sapiens 0 505
ENST00000537529 MKS1-001 protein_coding Homo_sapiens 0 850
ENST00000578789 MKS1-005 nonsense_mediated_decay Homo_sapiens 3e-31 139
ENST00000580127 MKS1-008 nonsense_mediated_decay Homo_sapiens 0 520
ENST00000581180 MKS1-006 retained_intron Homo_sapiens 0 494
ENST00000581761 MKS1-007 nonsense_mediated_decay Homo_sapiens 0 276
ENST00000582328 LPO-006 protein_coding Homo_sapiens 2e-34 152

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