C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Meckel syndrome, type 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000537529 MKS1-001 ENSG00000011143 9606 - 17:58205740-58219605 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENST00000537529
Transcript ID Breast
ENST00000537529 1.271±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0036038 ISS TCTN-B9D complex
GO:0036064 IDA ciliary basal body
GO:0042384 IMP cilium assembly
GO:0060271 ISS cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038196 Mks1-001 protein_coding Mus_musculus 0 1746
ENSMUST00000130135 Mks1-004 retained_intron Mus_musculus 0 850
ENSMUST00000153729 Mks1-002 retained_intron Mus_musculus 0 769
ENSMUST00000135369 Mks1-003 retained_intron Mus_musculus 0 468

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