C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: outer dense fiber of sperm tails 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130271 Odf4-003 ENSMUSG00000032921 10090 - 11:68921836-68927081 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartKidneyTestisENSMUST00000130271
Transcript ID Adipose Brain Heart Kidney Testis
ENSMUST00000130271 0.054±0.00 1.060±0.07 0.164±0.07 0.242±0.00 117.358±53.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088C CIL_00088C_0002 VISTA 11:68323475-68924174
CIL_0009AZ CIL_0009AZ_0002 VISTA 11:68337699-68940744

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001520 IDA outer dense fiber
GO:0003674 ND molecular_function
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0030154 IEA cell differentiation
GO:0031514 IDA motile cilium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328248 ODF4-001 protein_coding Homo_sapiens 3e-39 167
ENST00000584943 ODF4-002 protein_coding Homo_sapiens 2e-38 163

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